6ITT
Crystal structure of unactivated c-KIT in complex with compound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-07-25 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.9 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.629, 63.087, 196.812 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.428 - 2.103 |
R-factor | 0.1883 |
Rwork | 0.186 |
R-free | 0.23460 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.976 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX (dev_2621) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.180 |
High resolution limit [Å] | 2.100 | 4.520 | 2.100 |
Rmerge | 0.057 | 0.024 | 0.596 |
Rmeas | 0.068 | 0.028 | 0.701 |
Rpim | 0.036 | 0.015 | 0.365 |
Number of reflections | 45999 | 4744 | 4548 |
<I/σ(I)> | 11 | ||
Completeness [%] | 99.5 | 96.5 | 100 |
Redundancy | 3.5 | 3.3 | 3.5 |
CC(1/2) | 0.999 | 0.761 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 15% PEG 3350, 0.1M sodium citrate tribasic dihydrate, pH 5.6, 3% ethylene glycol, 2% benzamidine hydrochloride |