6ITM
Crystal structure of FXR in complex with agonist XJ034
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97894 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 101.484, 130.192, 37.654 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.278 - 2.500 |
R-factor | 0.1943 |
Rwork | 0.192 |
R-free | 0.24180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4QE6 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.590 |
High resolution limit [Å] | 2.500 | 5.380 | 2.500 |
Rmerge | 0.060 | 0.028 | 0.830 |
Rmeas | 0.064 | 0.030 | 0.883 |
Rpim | 0.021 | 0.010 | 0.297 |
Total number of observations | 159545 | ||
Number of reflections | 18007 | 1953 | 1741 |
<I/σ(I)> | 10.8 | ||
Completeness [%] | 99.8 | 99.8 | 99.8 |
Redundancy | 8.9 | 7.9 | 8.8 |
CC(1/2) | 0.999 | 0.770 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | 0.2M Ammonium acetate, 0.1M Bis-Tris pH 6.5, 25% w/v Polyethylene glycol 3350 |