6HXM
Structure of the citryl-CoA lyase core module of human ATP citrate lyase in complex with citrate and CoASH in space group C2221
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-25 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.00003 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 82.829, 111.192, 143.372 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.720 - 1.300 |
R-factor | 0.167 |
Rwork | 0.167 |
R-free | 0.17800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | M. soehngenii ACL |
RMSD bond length | 0.010 |
RMSD bond angle | 1.050 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.380 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmeas | 0.135 | 2.032 |
Rpim | 0.061 | 1.148 |
Number of reflections | 160720 | 25336 |
<I/σ(I)> | 12.1 | 1.12 |
Completeness [%] | 99.5 | 97.6 |
Redundancy | 10.3 | 10.3 |
CC(1/2) | 0.999 | 0.508 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.1 M Na/K phosphate pH 5.5 0.1 M RbCl 0.1 M Na-citrate pH 5.5 25% PEG Smear Medium 25% PEG400 Citrate, CoAS Protein sample buffer 20 mM HEPES pH 7.4, 150 mM NaCL supplemented with 50 mM citrate pH 7.4 and 10 mM CoASH |