6HTF
Crystal structure of human Btk SH2 domain bound to rF10 repebody
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-23 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 145.521, 32.947, 80.624 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.564 - 2.102 |
R-factor | 0.2144 |
Rwork | 0.210 |
R-free | 0.25600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SH2 domain (Chain A) was based in an homology model generated using 2GE9 2EU0 and 3S9K. The repebody (chain B) initial model was 5B4P |
RMSD bond length | 0.007 |
RMSD bond angle | 0.889 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((v1.13_2998)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.564 | 2.230 |
High resolution limit [Å] | 2.102 | 2.102 |
Rmeas | 0.102 | 0.810 |
Number of reflections | 43493 | 7027 |
<I/σ(I)> | 12.99 | |
Completeness [%] | 99.7 | 99.5 |
Redundancy | 3.89 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | Morpheus B12 BUFFER 0.09M Halogens 0,1M Buffer 3 pH 8.5 50% precipitant 4 |