6H2U
Crystal structure of human METTL5-TRMT112 complex, the 18S rRNA m6A1832 methyltransferase at 1.6A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-16 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97857 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 56.887, 70.634, 84.776 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.317 - 1.600 |
R-factor | 0.1872 |
Rwork | 0.186 |
R-free | 0.21480 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.1) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.240 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.068 | 0.887 |
Rmeas | 0.075 | 0.978 |
Rpim | 0.030 | 0.406 |
Total number of observations | 279014 | |
Number of reflections | 45777 | 2230 |
<I/σ(I)> | 14 | |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 6.1 | 5.8 |
CC(1/2) | 0.998 | 0.623 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 25% PEG 4,000; 0.2 M ammonium sulfate; 100 mM Na citrate pH 5.6 |