6GWG
Alpha-galactosidase from Thermotoga maritima in complex with cyclohexene-based carbasugar mimic of galactose covalently linked to the nucleophile
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I03 |
| Synchrotron site | Diamond |
| Beamline | I03 |
| Temperature [K] | 80 |
| Detector technology | PIXEL |
| Collection date | 2017-01-21 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.976 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 66.730, 95.870, 97.440 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 24.360 - 1.770 |
| R-factor | 0.16969 |
| Rwork | 0.167 |
| R-free | 0.21495 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5m0x |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.207 |
| Data reduction software | xia2 |
| Data scaling software | xia2 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 24.360 | 1.820 |
| High resolution limit [Å] | 1.770 | 1.770 |
| Rmerge | 0.118 | 1.438 |
| Rpim | 0.074 | 0.903 |
| Number of reflections | 61617 | 4481 |
| <I/σ(I)> | 9 | 1.1 |
| Completeness [%] | 99.9 | 56.4 |
| Redundancy | 6.6 | 6.7 |
| CC(1/2) | 0.997 | 0.564 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M magnesium sulfate, 20% (w/v) PEG 3350 |






