6GCU
MET receptor in complex with InlB internalin domain and DARPin A3A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9772 |
Spacegroup name | P 31 |
Unit cell lengths | 144.874, 144.874, 128.896 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.149 - 6.001 |
R-factor | 0.2629 |
Rwork | 0.263 |
R-free | 0.27090 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2uzy |
RMSD bond length | 0.011 |
RMSD bond angle | 1.768 |
Data reduction software | XDS (20170923) |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX ((dev_3071: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.150 | 6.700 |
High resolution limit [Å] | 6.000 | 6.000 |
Rmerge | 0.275 | 1.701 |
Rmeas | 0.296 | 1.813 |
Rpim | 0.107 | 0.646 |
Number of reflections | 7600 | 2174 |
<I/σ(I)> | 5.2 | 1.4 |
Completeness [%] | 99.9 | 100 |
Redundancy | 7.4 | 7.7 |
CC(1/2) | 0.982 | 0.552 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293.15 | 0.1 M HEPES sodium salt pH 7.5, 12% w/v PEG4000, protein complex concentration 5 mg/mL, equimolar ratio of macromolecules, drop size 0.2 uL, protein:reservoir ratio 1:1 |