6GCD

DNA binding domain of restriction endonuclease McrBC in complex with 5-hydroxymethylcytosine DNA

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	ROTATING ANODE
Source details	RIGAKU R-AXIS IV
Temperature [K]	100
Detector technology	IMAGE PLATE
Collection date	2012-08-01
Detector	RIGAKU RAXIS IV
Wavelength(s)	1.54
Spacegroup name	P 21 21 21
Unit cell lengths	36.071, 68.934, 143.708
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	23.879 - 1.800
R-factor	0.1706
Rwork	0.166
R-free	0.21400
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	3ssc
RMSD bond length	0.018
RMSD bond angle	1.525
Data reduction software	XDS
Data scaling software	SCALA
Phasing software	MOLREP
Refinement software	PHENIX ((1.12_2829: ???))

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	23.880	1.864
High resolution limit [Å]	1.800	1.800
Rmerge	0.066	0.451
Number of reflections	64054	6694
<I/σ(I)>	48.73	0.0548
Completeness [%]	99.8	100
Redundancy	18.3	15

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION	5.5	293	10 mM Bis-Tris, pH 5.5, 0.2 M ammonium-acetate and 14% PEG4000