6FMD
Targeting myeloid differentiation using potent human dihydroorotate dehydrogenase (hDHODH) inhibitors based on 2-hydroxypyrazolo[1,5-a]pyridine scaffold
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID23-1 |
| Synchrotron site | ESRF |
| Beamline | ID23-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-04-08 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.97242 |
| Spacegroup name | P 32 2 1 |
| Unit cell lengths | 90.441, 90.441, 122.446 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 78.320 - 1.580 |
| R-factor | 0.138 |
| Rwork | 0.137 |
| R-free | 0.15970 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5mut |
| RMSD bond length | 0.014 |
| RMSD bond angle | 1.647 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA (3.3.21) |
| Phasing software | PHASER |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 78.324 | 25.534 | 1.670 |
| High resolution limit [Å] | 1.580 | 5.000 | 1.580 |
| Rmerge | 0.026 | 0.740 | |
| Rmeas | 0.080 | 0.029 | 0.835 |
| Rpim | 0.036 | 0.013 | 0.380 |
| Number of reflections | 79465 | 2684 | 11495 |
| <I/σ(I)> | 11 | 21 | 1 |
| Completeness [%] | 99.6 | 98.2 | 99.7 |
| Redundancy | 4.6 | 4.5 | 4.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.2 | 293 | 0.2M KBr, 0.2M KSCN, 0.1M NaAc pH 5.2, 25% PEG 400, 2% PGA-LM |






