6FIN
DDR1, 3-[(3-cyclopropyl-1,2,4-oxadiazol-5-yl)methyl]-8-(1H-indazole-5-carbonyl)-1-phenyl-1,3,8-triazaspiro[4.5]decan-4-one, 1.670A, P1211, Rfree=22.8%
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-02-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 40.960, 62.120, 63.990 |
Unit cell angles | 90.00, 106.74, 90.00 |
Refinement procedure
Resolution | 43.625 - 1.670 |
R-factor | 0.1995 |
Rwork | 0.198 |
R-free | 0.22790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.008 |
RMSD bond angle | 1.092 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (dev_1931) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.630 | 1.910 |
High resolution limit [Å] | 1.810 | 1.810 |
Rmerge | 0.051 | 0.456 |
Rmeas | 0.063 | 0.035 |
Total number of observations | 119011 | |
Number of reflections | 28062 | 421 |
<I/σ(I)> | 13.2 | 2.1 |
Completeness [%] | 99.6 | 98.9 |
Redundancy | 3.37 | 3.16 |
CC(1/2) | 0.999 | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 11.3 mg/mL protein in 20mM HEPES/NaOH pH7.5, 5mM DTT, 5% glycerol, 0.1M NaCl mixed 1.3:1 with 90mM MES/NaOH pH6.5, 0.18M potassium iodide, 0.2M Li2SO4, 22.5% PEG 4K |