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6EZB

Crystal Structure of human tRNA-dihydrouridine(20) synthase catalytic domain Q305K mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2016-12-07
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.980105
Spacegroup nameI 2 2 2
Unit cell lengths72.080, 84.110, 144.350
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.610 - 2.250
R-factor0.183
Rwork0.181
R-free0.22300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4xp7
RMSD bond length0.010
RMSD bond angle1.130
Data reduction softwareXDS (20180409)
Data scaling softwareSTARANISO (1.10.15)
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.3)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.6102.450
High resolution limit [Å]2.2502.250
Rmerge0.1371.609
Rmeas1.714
Number of reflections16301
<I/σ(I)>12.61.4
Completeness [%]93.493.53
Redundancy9.28.7
CC(1/2)0.9980.385
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2922.2 M ammonium sulfate

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