6ETW
Crystal structure of KDM4D with tetrazolhydrazide compound 3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 71.674, 71.674, 150.662 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.036 - 1.350 |
R-factor | 0.1287 |
Rwork | 0.128 |
R-free | 0.15870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ets |
RMSD bond length | 0.028 |
RMSD bond angle | 2.328 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.036 | 48.036 | 1.430 |
High resolution limit [Å] | 1.350 | 4.030 | 1.350 |
Rmerge | 0.071 | 0.023 | 0.955 |
Rmeas | 0.077 | 0.025 | 1.034 |
Total number of observations | 1122708 | ||
Number of reflections | 165316 | 6205 | 26447 |
<I/σ(I)> | 16.41 | 63.98 | 1.84 |
Completeness [%] | 99.6 | 99.9 | 98.3 |
Redundancy | 6.791 | 6.834 | 6.804 |
CC(1/2) | 0.999 | 1.000 | 0.676 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7 | 293 | 100mM HEPES, 180mM ammonium sulphate, 24% PEG 3350 |