6ETV
Crystal structure of KDM4D with tetrazolhydrazide compound 2
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.1 |
| Synchrotron site | BESSY |
| Beamline | 14.1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-10-20 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9184 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 71.490, 71.490, 150.444 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.918 - 1.180 |
| R-factor | 0.1216 |
| Rwork | 0.121 |
| R-free | 0.15000 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6ets |
| RMSD bond length | 0.024 |
| RMSD bond angle | 2.216 |
| Data reduction software | X-Area |
| Data scaling software | XSCALE |
| Phasing software | REFMAC |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 47.918 | 47.918 | 1.250 |
| High resolution limit [Å] | 1.180 | 3.520 | 1.180 |
| Rmerge | 0.067 | 0.028 | 0.878 |
| Rmeas | 0.072 | 0.030 | 0.955 |
| Total number of observations | 1671018 | ||
| Number of reflections | 247119 | 9246 | 39529 |
| <I/σ(I)> | 16.04 | 64.4 | 2.01 |
| Completeness [%] | 99.8 | 99.9 | 98.7 |
| Redundancy | 6.762 | 6.867 | 6.475 |
| CC(1/2) | 0.999 | 0.999 | 0.694 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 7 | 293 | 100mM HEPES, 180mM ammonium sulphate, 24% PEG 3350 |






