Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6EBS

Crystal structure of Leishmania major dihydroorotate dehydrogenase mutant H174A in complex with orotate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2015-05-08
DetectorRIGAKU SATURN 944+
Wavelength(s)1.541780
Spacegroup nameP 61
Unit cell lengths144.279, 144.279, 69.913
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.580 - 2.050
R-factor0.1677
Rwork0.166
R-free0.20510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3gye
RMSD bond length0.005
RMSD bond angle1.051
Data scaling softwareAimless (0.5.1)
Phasing softwareMOLREP (11.5.05)
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]46.58046.5802.110
High resolution limit [Å]2.0508.9402.050
Rmerge0.1360.0480.430
Number of reflections520986693935
<I/σ(I)>14.2
Completeness [%]99.899.197.6
Redundancy7.683.3
CC(1/2)0.9960.9990.805
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.92930.1M sodium citrate tribasic dihydrate pH 5.9, 1.1M lithium sulfate, 0.3M ammonium sulfate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon