6DWS
Crystal structure of human GRP78 in complex with (2R,3R,4S,5R)-2-(6-amino-8-((2-chlorobenzyl)amino)-9H-purin-9-yl)-5-(hydroxymethyl)tetrahydrofuran-3,4-diol
Experimental procedure
| Experimental method | LAUE |
| Source type | SYNCHROTRON |
| Source details | CLSI BEAMLINE 08ID-1 |
| Synchrotron site | CLSI |
| Beamline | 08ID-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-10-04 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.69 - 1.9 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 54.916, 74.611, 86.848 |
| Unit cell angles | 90.00, 98.10, 90.00 |
Refinement procedure
| Resolution | 27.820 - 1.900 |
| R-factor | 0.215 |
| Rwork | 0.213 |
| R-free | 0.24800 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | BUSTER |
| Refinement software | BUSTER (2.10.2) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.020 |
| High resolution limit [Å] | 1.900 | 1.900 |
| Number of reflections | 54507 | |
| <I/σ(I)> | 19.75 | |
| Completeness [%] | 99.4 | |
| Redundancy | 4.43 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 298.15 | 24 to 26% PEG 3350, 0.1 M Tris-HCl and 0.2 M NaCl (by microseeding with the initial crystals from 0.1 M Tris- HCl pH 8.5, 25% PEG 3350 and 0.1 M Na/K tartrate) |






