6DU6
Crystal structure of the pyruvate kinase (PK1) from the mosquito Aedes aegypti
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CAMD BEAMLINE GCPCC |
| Synchrotron site | CAMD |
| Beamline | GCPCC |
| Temperature [K] | 145 |
| Detector technology | CCD |
| Collection date | 2016-06-09 |
| Detector | MAR CCD 130 mm |
| Wavelength(s) | 1.38079 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 109.229, 113.654, 202.075 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 49.530 - 3.513 |
| R-factor | 0.2744 |
| Rwork | 0.271 |
| R-free | 0.31860 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3n25 |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.726 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 49.530 | 3.730 |
| High resolution limit [Å] | 3.510 | 3.510 |
| Rmerge | 0.279 | 1.330 |
| Rmeas | 0.323 | 1.550 |
| Number of reflections | 60499 | 9668 |
| <I/σ(I)> | 5.79 | 0.99 |
| Completeness [%] | 99.8 | 99.5 |
| Redundancy | 3.9 | 3.8 |
| CC(1/2) | 0.980 | 0.460 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 0.2M ammonium citrate tribasic pH 7, 20% w/v PEG 3350 |
