6DPL
Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with an RNA/DNA Hybrid: Reaction in 10 mM Mg2+ and 200 mM Rb+ for 720 s at 21 C
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-15 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 81.856, 37.521, 62.706 |
Unit cell angles | 90.00, 97.31, 90.00 |
Refinement procedure
Resolution | 19.495 - 1.450 |
R-factor | 0.152 |
Rwork | 0.151 |
R-free | 0.17920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 1ZBL |
RMSD bond length | 0.007 |
RMSD bond angle | 1.024 |
Data reduction software | HKL-2000 |
Data scaling software | Aimless (0.5.31) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.500 | 19.500 | 1.470 |
High resolution limit [Å] | 1.450 | 7.940 | 1.450 |
Rmerge | 0.030 | 0.016 | 0.778 |
Rmeas | 0.043 | 0.023 | 1.100 |
Rpim | 0.030 | 0.016 | 0.778 |
Total number of observations | 64252 | ||
Number of reflections | 33423 | 216 | 1429 |
<I/σ(I)> | 13.1 | ||
Completeness [%] | 98.9 | 93.3 | 88.5 |
Redundancy | 1.9 | 1.8 | 1.8 |
CC(1/2) | 0.999 | 0.999 | 0.371 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | 14% PEG3350, 20% glycerol, 200 mM KI, and 25 mM CaCl2 |