6DO4
KLHDC2 ubiquitin ligase in complex with SelS C-end degron
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.2.1 |
| Synchrotron site | ALS |
| Beamline | 8.2.1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-12-01 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 44.637, 88.596, 88.824 |
| Unit cell angles | 90.00, 104.77, 90.00 |
Refinement procedure
| Resolution | 39.370 - 2.200 |
| R-factor | 0.1697 |
| Rwork | 0.167 |
| R-free | 0.21600 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2vpj |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.894 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.240 |
| High resolution limit [Å] | 2.200 | 5.970 | 2.200 |
| Rmerge | 0.138 | 0.057 | 0.592 |
| Rmeas | 0.156 | 0.064 | 0.702 |
| Rpim | 0.073 | 0.030 | 0.369 |
| Number of reflections | 33761 | 1755 | 1576 |
| <I/σ(I)> | 5.9 | ||
| Completeness [%] | 99.3 | 99.8 | 93 |
| Redundancy | 4.5 | 4.7 | 3.3 |
| CC(1/2) | 0.996 | 0.665 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 298.15 | 0.03M MgCl2*6H2O, 0.03M CaCl2*2H2O, 0.05M Imidazole, 0.05M MES monohydrate, 13.25% v/v MPD, 13.25% PEG1000, 13.25% w/v PEG3350, pH 6.8. |






