Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DIK

Crystal structure of Bothropstoxin I (BthTX-I) complexed to Chicoric acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsLNLS BEAMLINE W01B-MX2
Synchrotron siteLNLS
BeamlineW01B-MX2
Temperature [K]100
Detector technologyCCD
Collection date2014-02-12
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.425
Spacegroup nameP 1 21 1
Unit cell lengths39.558, 71.632, 44.791
Unit cell angles90.00, 109.02, 90.00
Refinement procedure
Resolution27.346 - 1.930
R-factor0.1664
Rwork0.165
R-free0.20040
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3iq3
RMSD bond length0.004
RMSD bond angle0.694
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.000
High resolution limit [Å]1.9204.1601.930
Rmerge0.0860.0630.257
Rmeas0.1040.0780.310
Rpim0.0580.0450.169
Number of reflections1761317191786
<I/σ(I)>11.2
Completeness [%]97.892.799.8
Redundancy3.22.93.2
CC(1/2)0.9890.916
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP928330% PEG4000, 0.1M Tris HCl, 0.1M Lithium sulfate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon