6DIK
Crystal structure of Bothropstoxin I (BthTX-I) complexed to Chicoric acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-12 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.425 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.558, 71.632, 44.791 |
Unit cell angles | 90.00, 109.02, 90.00 |
Refinement procedure
Resolution | 27.346 - 1.930 |
R-factor | 0.1664 |
Rwork | 0.165 |
R-free | 0.20040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3iq3 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.694 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.000 |
High resolution limit [Å] | 1.920 | 4.160 | 1.930 |
Rmerge | 0.086 | 0.063 | 0.257 |
Rmeas | 0.104 | 0.078 | 0.310 |
Rpim | 0.058 | 0.045 | 0.169 |
Number of reflections | 17613 | 1719 | 1786 |
<I/σ(I)> | 11.2 | ||
Completeness [%] | 97.8 | 92.7 | 99.8 |
Redundancy | 3.2 | 2.9 | 3.2 |
CC(1/2) | 0.989 | 0.916 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 283 | 30% PEG4000, 0.1M Tris HCl, 0.1M Lithium sulfate |