6DGR
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with CAY10638
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.2 |
| Synchrotron site | ALS |
| Beamline | 5.0.2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-04-08 |
| Detector | DECTRIS PILATUS3 S 6M |
| Wavelength(s) | 0.97741 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 92.861, 60.600, 117.660 |
| Unit cell angles | 90.00, 103.14, 90.00 |
Refinement procedure
| Resolution | 50.340 - 2.150 |
| R-factor | 0.2187 |
| Rwork | 0.216 |
| R-free | 0.26390 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1prg |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.036 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.340 | 2.227 |
| High resolution limit [Å] | 2.150 | 2.150 |
| Number of reflections | 33678 | 3226 |
| <I/σ(I)> | 5.84 | 1.34 |
| Completeness [%] | 96.4 | 92.89 |
| Redundancy | 1.7 | 1.7 |
| CC(1/2) | 0.995 | 0.805 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.8M SODIUM CITRATE, 100mM TRIS, pH 7.6 |






