6DGF
Ubiquitin Variant bound to USP2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 93.15 |
Detector technology | CCD |
Collection date | 2016-07-14 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 159.978, 58.093, 46.842 |
Unit cell angles | 90.00, 98.12, 90.00 |
Refinement procedure
Resolution | 39.069 - 2.340 |
R-factor | 0.1782 |
Rwork | 0.176 |
R-free | 0.22400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ubq 2hd5 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.459 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.420 |
High resolution limit [Å] | 2.340 | 2.340 |
Number of reflections | 18044 | 1628 |
<I/σ(I)> | 31.4 | 8.6 |
Completeness [%] | 99.0 | 90.8 |
Redundancy | 3.2 | |
CC(1/2) | 0.961 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 0.1 M MES buffer pH 6, 12% (w/v) PEG3350, 0.2M sodium sulfate |