Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DG3

LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, in complex with caesium

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2016-07-24
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97856
Spacegroup nameC 2 2 21
Unit cell lengths152.371, 154.161, 328.864
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.910 - 2.944
R-factor0.2002
Rwork0.196
R-free0.27430
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5udq
Data reduction softwareXDS
Data scaling softwareAimless (0.5.27)
Phasing softwarePHASER (2.6.0)
Refinement softwarePHENIX (dev-3092)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.91048.9103.000
High resolution limit [Å]2.94015.3002.940
Rmerge0.1120.0400.470
Rmeas0.1230.0450.514
Rpim0.0490.0210.205
Number of reflections814896274232
<I/σ(I)>14.8
Completeness [%]99.395.695
Redundancy6.24.46
CC(1/2)0.9950.9970.876
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5294.155 ul ~27 mg/ml LarE (100 mM Tris-HCl pH 7.5, 300 mM NaCl) mixed with 1 ul 1 M cesium chloride and 4 ul of reservoir solution. Hanging drop reservoir contained 100 ul of 30% v/v pentaerythritol ethoxylate (15/4 EO/OH), 50 mM BIS-TRIS pH 6.5, 100 mM ammonium sulfate.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon