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6DD4

Crystal Structure of the Human vaccinia-related kinase bound to a N,N-dipropyl-dihydropteridine inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2017-12-18
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.968610
Spacegroup nameP 21 21 21
Unit cell lengths91.596, 96.168, 191.871
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.960 - 2.100
R-factor0.19622
Rwork0.195
R-free0.22555
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3op5
RMSD bond length0.012
RMSD bond angle1.498
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.9602.140
High resolution limit [Å]2.1002.100
Rmerge0.1061.157
Rpim0.0660.736
Number of reflections995224898
<I/σ(I)>11.91.5
Completeness [%]100.0100
Redundancy6.76.5
CC(1/2)0.9980.687
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729327.5% PEG3350, 200 mM LiSO4, 0.1M SBG, pH 7.0

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PDB entries from 2024-05-15

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