6D1M
Design, synthesis, and X-ray of selenides bearing benzenesulfonamide moiety with neuropathic pain modulating effects
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-07-06 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.953700 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.378, 41.599, 72.196 |
Unit cell angles | 90.00, 104.21, 90.00 |
Refinement procedure
Resolution | 41.600 - 1.210 |
R-factor | 0.1333 |
Rwork | 0.132 |
R-free | 0.15721 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4cq0 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.440 |
Data reduction software | ADDREF |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0218) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.600 | 1.230 |
High resolution limit [Å] | 1.210 | 1.210 |
Rmerge | 0.094 | 0.704 |
Rpim | 0.037 | 0.290 |
Number of reflections | 73224 | 3370 |
<I/σ(I)> | 15.6 | |
Completeness [%] | 97.9 | 91.2 |
Redundancy | 7.2 | 6.4 |
CC(1/2) | 0.999 | 0.825 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.6 | 281 | 200 nL 7 mg/mL protein + 200 nL reservoir (2.8 M ammonium sulfate, 100 mM Tris, pH 8.6) |