6D12
Crystal structure of C-terminal xRRM domain of human Larp7 bound to 7SK stem-loop 4 RNA
Experimental procedure
| Experimental method | MAD |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-C |
| Synchrotron site | APS |
| Beamline | 24-ID-C |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-07-20 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.979300 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 47.910, 34.030, 95.010 |
| Unit cell angles | 90.00, 95.18, 90.00 |
Refinement procedure
| Resolution | 94.622 - 2.205 |
| R-factor | 0.2299 |
| Rwork | 0.228 |
| R-free | 0.26730 |
| Structure solution method | MAD |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.999 |
| Data reduction software | XDS (20170615) |
| Data scaling software | XSCALE (20170615) |
| Phasing software | HKL2Map (2016/1) |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 94.622 | 94.622 | 2.260 |
| High resolution limit [Å] | 2.200 | 9.830 | 2.200 |
| Rmerge | 0.169 | 0.091 | 1.191 |
| Rmeas | 0.181 | 0.098 | 1.279 |
| Total number of observations | 120222 | ||
| Number of reflections | 15929 | 207 | 1187 |
| <I/σ(I)> | 6.54 | 17.27 | 1.43 |
| Completeness [%] | 99.9 | 99.5 | 99.9 |
| Redundancy | 7.547 | 6.604 | 7.48 |
| CC(1/2) | 0.996 | 0.998 | 0.720 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | 0.05M Na Cacodylate,0.08M Mg acetate, 24% PEG 4000 |






