6CHB
Crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and IOMA
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-2 |
| Synchrotron site | SSRL |
| Beamline | BL12-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-04-26 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 176.752, 176.752, 458.039 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 39.631 - 6.801 |
| R-factor | 0.3232 |
| Rwork | 0.318 |
| R-free | 0.41670 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5t3z 5ud9 |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.717 |
| Data reduction software | XDS |
| Data scaling software | Aimless (3.3.22) |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 39.700 | 39.700 | 7.020 |
| High resolution limit [Å] | 6.660 | 21.070 | 6.660 |
| Rmerge | 0.333 | 0.090 | 4.752 |
| Rmeas | 0.347 | 0.095 | 4.954 |
| Rpim | 0.097 | 0.029 | 1.365 |
| Number of reflections | 13894 | 430 | 1890 |
| <I/σ(I)> | 6.4 | ||
| Completeness [%] | 98.7 | 83.6 | 95 |
| Redundancy | 12.4 | 9.6 | 12.5 |
| CC(1/2) | 0.988 | 0.993 | 0.334 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 5% Tacismate pH 8.0, 15% PEG 3350 |






