6CH9
Crystal structure of a natively-glycosylated B41 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | H 3 2 |
Unit cell lengths | 241.080, 241.080, 345.470 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.900 - 4.850 |
R-factor | 0.285 |
Rwork | 0.285 |
R-free | 0.29200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5t3z 5ud9 4toy |
RMSD bond length | 0.008 |
RMSD bond angle | 1.050 |
Data reduction software | XDS |
Data scaling software | Aimless (0.6.2) |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.900 | 5.310 |
High resolution limit [Å] | 4.850 | 4.850 |
Rmerge | 0.259 | 5.063 |
Rmeas | 0.273 | 5.351 |
Rpim | 0.086 | 1.712 |
Total number of observations | 183962 | |
Number of reflections | 18521 | 4397 |
<I/σ(I)> | 5 | |
Completeness [%] | 99.8 | 100 |
Redundancy | 9.9 | 9.6 |
CC(1/2) | 0.996 | 0.347 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 5% Tacismate pH 8.0, 15% PEG 3350 |