6CAP
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with Sisomicin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 400.970, 400.970, 175.050 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.908 - 3.400 |
R-factor | 0.1833 |
Rwork | 0.183 |
R-free | 0.22980 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.823 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.908 | 39.908 | 3.200 |
High resolution limit [Å] | 3.120 | 13.950 | 3.120 |
Rmerge | 1.011 | 0.065 | |
Rmeas | 1.017 | 0.066 | |
Total number of observations | 23977077 | ||
Number of reflections | 244903 | 2916 | 13000 |
<I/σ(I)> | 7.64 | 61.58 | 0.19 |
Completeness [%] | 97.7 | 93.6 | 70.9 |
Redundancy | 97.904 | 90.498 | 43.218 |
CC(1/2) | 0.997 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6.5 | 298 | 17% MPD |