6BAH
Trastuzumab Fab v3 with 5-diphenyl meditope variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2016-07-26 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.410, 105.150, 116.980 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.575 - 1.900 |
R-factor | 0.1657 |
Rwork | 0.164 |
R-free | 0.19420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ioi |
RMSD bond length | 0.006 |
RMSD bond angle | 0.854 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.600 | 1.950 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmeas | 0.115 | 1.060 |
Number of reflections | 52561 | 3714 |
<I/σ(I)> | 13.2 | 1.7 |
Completeness [%] | 99.7 | 97.1 |
Redundancy | 5.1 | 4.9 |
CC(1/2) | 0.998 | 0.623 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Tris, pH 7.5, 24 mM NaCl, 15% PEG 3350 |