6AX4
Plk-1 polo-box domain in complex with histidine N(tau)-cyclized Macrocycle 5b.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-12-04 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.97917 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 35.449, 51.294, 58.034 |
| Unit cell angles | 90.00, 100.84, 90.00 |
Refinement procedure
| Resolution | 17.408 - 1.450 |
| R-factor | 0.1338 |
| Rwork | 0.132 |
| R-free | 0.16560 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4dfw |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.048 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 17.408 | 100.000 | 1.480 |
| High resolution limit [Å] | 1.450 | 3.940 | 1.450 |
| Rmerge | 0.066 | 0.041 | 0.628 |
| Rmeas | 0.073 | 0.046 | 0.709 |
| Rpim | 0.031 | 0.020 | 0.326 |
| Total number of observations | 196289 | ||
| Number of reflections | 36144 | 1825 | 1797 |
| <I/σ(I)> | 8.6 | ||
| Completeness [%] | 99.4 | 96.9 | 99.1 |
| Redundancy | 5.4 | 5.3 | 4.6 |
| CC(1/2) | 0.997 | 0.769 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 291 | Well solution: 0.2 M Calcium Chloride, 12.5% PEG-3350 Protein: 10 mg/ml PBD-macrocycle complex in 0.5 M Sodium Chloride, 10 mM TRIS pH 8.0, 0.4 M ammonium acetate 1:1 mix of protein complex and well solution |






