6AC0
Crystal structure of TRADD death domain GlcNAcylated by EPEC effector NleB
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2013-11-09 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97899 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 28.600, 28.600, 264.720 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.435 - 1.449 |
R-factor | 0.1864 |
Rwork | 0.184 |
R-free | 0.22420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3oq9 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.873 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.600 | 1.530 |
High resolution limit [Å] | 1.449 | 1.449 |
Rmerge | 0.111 | 0.349 |
Number of reflections | 20061 | 2913 |
<I/σ(I)> | 8.1 | 3.8 |
Completeness [%] | 96.7 | 99.3 |
Redundancy | 4.6 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 1.6 M Na/KPO4, pH 6.0 |