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6A35

Crystal structure of 5-methylthioribose 1-phosphate isomerase from Pyrococcus horikoshii OT3 - Form II

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2018-03-10
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 1
Unit cell lengths46.170, 91.230, 102.070
Unit cell angles108.58, 98.09, 104.62
Refinement procedure
Resolution93.890 - 2.650
R-factor0.2146
Rwork0.210
R-free0.29420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6a34
RMSD bond length0.012
RMSD bond angle1.520
Data reduction softwareMOSFLM (7.2.1)
Data scaling softwareAimless (0.5.28)
Phasing softwarePHASER (2.6.1)
Refinement softwareREFMAC (5.8.0155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]93.89082.0202.760
High resolution limit [Å]2.6509.5502.650
Rmerge0.0960.0570.557
Rmeas0.1130.0690.657
Rpim0.0600.0390.346
Number of reflections415609054648
<I/σ(I)>9.4
Completeness [%]96.597.894.9
Redundancy3.63.33.6
CC(1/2)0.9920.9870.819
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP82930.05M ammonium acetate, 0.1M tris pH 8.0, 16% PEG 10000, 0.05M sodium acetate

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