5ZNX
Crystal structure of CM14-treated HlyU from Vibrio vulnificus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-03-09 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97960 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 35.142, 35.142, 180.380 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.744 - 2.114 |
R-factor | 0.2398 |
Rwork | 0.238 |
R-free | 0.26750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3jth |
RMSD bond length | 0.004 |
RMSD bond angle | 0.808 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.140 |
High resolution limit [Å] | 2.114 | 2.114 |
Rmerge | 0.114 | 0.208 |
Rmeas | 0.116 | 0.217 |
Rpim | 0.021 | 0.062 |
Number of reflections | 6980 | 307 |
<I/σ(I)> | 24.1 | 5.6 |
Completeness [%] | 97.2 | 92.2 |
Redundancy | 19.7 | 9.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 287 | 0.1M HEPES (pH 8.0), 20% polyethylene glycol (PEG) 4K, 10% 2-propanol |