5ZMQ
Crystal structure of Zika NS3 protease with phenylacetyl-Lys-Lys-Arg-COOH inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-06-12 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.150, 60.330, 214.070 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.907 - 1.987 |
R-factor | 0.175 |
Rwork | 0.171 |
R-free | 0.20120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gpi |
RMSD bond length | 0.003 |
RMSD bond angle | 0.685 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.330 | 2.040 |
High resolution limit [Å] | 1.987 | 1.987 |
Rmerge | 0.107 | 0.486 |
Rmeas | 0.117 | 0.541 |
Rpim | 0.066 | 0.231 |
Number of reflections | 53862 | 3829 |
<I/σ(I)> | 10.3 | 2.9 |
Completeness [%] | 98.4 | 92.1 |
Redundancy | 5.6 | 5 |
CC(1/2) | 0.997 | 0.796 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293.15 | 2 M ammonium sulfate, 0.1 M sodium acetate trihydrate pH 4.6 |