Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5ZB0

Crystal structure of thymidylate kinase in complex with ADP and TDP from thermus thermophilus HB8

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyCCD
Collection date2014-09-24
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.9537
Spacegroup nameP 21 21 21
Unit cell lengths46.871, 47.385, 151.987
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.010 - 1.190
R-factor0.13006
Rwork0.129
R-free0.15290
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5x7j
RMSD bond length0.012
RMSD bond angle1.850
Data reduction softwareiMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0101.210
High resolution limit [Å]1.1901.190
Rpim0.0260.203
Number of reflections107494
<I/σ(I)>37.12
Completeness [%]98.4
Redundancy4
CC(1/2)0.9820.855
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH2950.2M MgCl2.6H2O, 0.1M Tris hydrochloride, 30% PEG 4000

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon