5ZB0
Crystal structure of thymidylate kinase in complex with ADP and TDP from thermus thermophilus HB8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-09-24 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.871, 47.385, 151.987 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.010 - 1.190 |
R-factor | 0.13006 |
Rwork | 0.129 |
R-free | 0.15290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5x7j |
RMSD bond length | 0.012 |
RMSD bond angle | 1.850 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.010 | 1.210 |
High resolution limit [Å] | 1.190 | 1.190 |
Rpim | 0.026 | 0.203 |
Number of reflections | 107494 | |
<I/σ(I)> | 37.12 | |
Completeness [%] | 98.4 | |
Redundancy | 4 | |
CC(1/2) | 0.982 | 0.855 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 295 | 0.2M MgCl2.6H2O, 0.1M Tris hydrochloride, 30% PEG 4000 |