Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5Z9L

Bacterial GyrB ATPase domain in complex with a chemical fragment

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2017-05-02
DetectorADSC QUANTUM 315r
Wavelength(s)0.979
Spacegroup nameP 21 21 21
Unit cell lengths61.070, 69.065, 102.121
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution57.210 - 1.600
R-factor0.22889
Rwork0.228
R-free0.24166
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4duh
RMSD bond length0.008
RMSD bond angle1.330
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]57.2201.680
High resolution limit [Å]1.6001.600
Rmerge0.0710.379
Number of reflections559277422
<I/σ(I)>10.82.7
Completeness [%]96.989.6
Redundancy5.23.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2810.1M Tris-HCl pH 7.5, 2.20M (NH4)2HPO4, 10mM 2-aminobenzimidazole

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon