5Z6H
Structure of periplasmic trehalase from Diamondback moth gut bacteria in the apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-04 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97937 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.250, 127.909, 156.139 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.319 - 2.300 |
R-factor | 0.1715 |
Rwork | 0.168 |
R-free | 0.22920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2jg0 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.926 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.320 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.121 | 0.592 |
Rmeas | 0.139 | 0.678 |
Rpim | 0.086 | 0.421 |
Number of reflections | 48818 | 4363 |
<I/σ(I)> | 9.5 | 2.5 |
Completeness [%] | 97.9 | 96.8 |
Redundancy | 4.2 | 4.2 |
CC(1/2) | 0.980 | 0.685 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 0.5M Ammonium sulphate, 25% PEG 4000, 15% glycerol |