5YLB
Crystal structure of Ofd2 from Schizosaccharomyces pombe at 1.80 A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97907 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 70.506, 80.386, 81.996 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.400 - 1.790 |
R-factor | 0.1876 |
Rwork | 0.185 |
R-free | 0.23290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3thp |
RMSD bond length | 0.012 |
RMSD bond angle | 1.180 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 57.400 |
High resolution limit [Å] | 1.790 |
Rmerge | 0.079 |
Number of reflections | 20695 |
<I/σ(I)> | 2.69 |
Completeness [%] | 99.9 |
Redundancy | 8.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 289 | 18% MPEG 5000, 0.1M HEPES,pH7.0 |