Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YID

Crystal Structure of KNI-10395 bound Plasmepsin II (PMII) from Plasmodium falciparum

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyCCD
Collection date2016-05-10
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.95372
Spacegroup nameI 4
Unit cell lengths107.600, 107.600, 72.560
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.000 - 2.100
R-factor0.19005
Rwork0.188
R-free0.22498
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.610
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.200
High resolution limit [Å]2.1002.100
Rmerge0.0631.090
Number of reflections242393157
<I/σ(I)>14.41.6
Completeness [%]99.8100
Redundancy55
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52950.1 M HEPES pH 7.5, 1.4 M sodium citrate tribasic dihydrate

239492

PDB entries from 2025-07-30

PDB statisticsPDBj update infoContact PDBjnumon