5YCD
Crystal structure of Poecilia reticulata adenylate kinase
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
| Synchrotron site | PAL/PLS |
| Beamline | 7A (6B, 6C1) |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-07-29 |
| Detector | ADSC QUANTUM 270 |
| Wavelength(s) | 0.979933 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 40.790, 81.505, 120.123 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 31.178 - 1.800 |
| R-factor | 0.1686 |
| Rwork | 0.167 |
| R-free | 0.20910 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5x6k |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.193 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.860 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Rpim | 0.027 | 0.193 |
| Number of reflections | 37999 | 3759 |
| <I/σ(I)> | 28.01 | 5.13 |
| Completeness [%] | 99.9 | 100 |
| Redundancy | 14.2 | 14.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 27.5% PEG3350, 0.1M Citric acid |






