5Y9I
Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with Co(II)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-06-23 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.263, 59.566, 116.950 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.875 - 1.901 |
R-factor | 0.1536 |
Rwork | 0.151 |
R-free | 0.19480 |
Structure solution method | SAD |
RMSD bond length | 0.006 |
RMSD bond angle | 0.827 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | SHELXCD |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 50.000 |
High resolution limit [Å] | 1.900 |
Number of reflections | 51868 |
<I/σ(I)> | 19.2 |
Completeness [%] | 98.3 |
Redundancy | 9.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 288 | 0.1M Sodium acetate (pH=4.6), 200mM Ammonium sulfate, 25% v/v PEG 4000 |