5Y7W
Crystal structure of the Nco-A1 PAS-B domain with YL-2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-11 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9794 |
Spacegroup name | P 61 |
Unit cell lengths | 62.501, 62.501, 137.177 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.919 - 2.250 |
R-factor | 0.1662 |
Rwork | 0.164 |
R-free | 0.20360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1oj5 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.915 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.290 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.128 | |
Rmeas | 0.131 | |
Rpim | 0.029 | |
Number of reflections | 14389 | 1431 |
<I/σ(I)> | 31.1 | 8 |
Completeness [%] | 99.9 | 99.51 |
Redundancy | 20.7 | 21.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1M HEPES (pH7.5), 10% v/v isopropanol, 20% w/v polyethylene glycol 4000 |