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5Y65

Phosphoglycerate mutase 1 complexed with a small molecule inhibitor KH2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL18U1
Synchrotron siteSSRF
BeamlineBL18U1
Temperature [K]100
Detector technologyCCD
Collection date2017-04-01
DetectorADSC QUANTUM 315r
Wavelength(s)0.97780
Spacegroup nameP 21 21 21
Unit cell lengths79.193, 82.929, 99.797
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.898 - 2.554
R-factor0.2001
Rwork0.198
R-free0.24800
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.237
Data scaling softwareHKL-2000
Phasing softwarePHASER (2.5.5)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.640
High resolution limit [Å]2.5505.4902.550
Rmerge0.1080.0570.744
Rmeas0.1190.0630.813
Rpim0.0480.0250.322
Total number of observations133070
Number of reflections2184123562128
<I/σ(I)>6.8
Completeness [%]99.499.699.9
Redundancy6.166.1
CC(1/2)0.9970.812
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP289MES pH 6.0, 8%PEG3350

218853

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