5Y39
Crystal structure of Ragulator complex (p18 76-145)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-06 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9792 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 110.659, 117.854, 157.805 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.010 - 2.650 |
R-factor | 0.21799 |
Rwork | 0.216 |
R-free | 0.26260 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.167 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0123) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.010 | 50.000 | 2.740 |
High resolution limit [Å] | 2.650 | 5.710 | 2.650 |
Rmerge | 0.046 | 0.022 | 0.509 |
Rmeas | 0.052 | 0.025 | 0.576 |
Rpim | 0.023 | 0.011 | 0.262 |
Number of reflections | 29802 | 3028 | 2971 |
<I/σ(I)> | 12.6 | ||
Completeness [%] | 98.1 | 94.3 | 98.6 |
Redundancy | 4.6 | 4.4 | 4.6 |
CC(1/2) | 0.997 | 0.801 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 289 | 0.1 M Bis-Tris (pH 5.5), and 25% (w/v) PEG 3350 |