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5Y35

Phosphoglycerate mutase 1 complexed with a small molecule inhibitor KH1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL18U1
Synchrotron siteSSRF
BeamlineBL18U1
Temperature [K]100
Detector technologyCCD
Collection date2014-05-03
DetectorADSC QUANTUM 315r
Wavelength(s)0.97915
Spacegroup nameP 21 21 21
Unit cell lengths82.836, 85.105, 103.046
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.751 - 1.994
R-factor0.2177
Rwork0.216
R-free0.24390
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4gpi
RMSD bond length0.009
RMSD bond angle1.202
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (phenix.refine: 1.8.2_1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.060
High resolution limit [Å]1.9904.2901.990
Rmerge0.1710.0830.974
Rmeas0.1730.093
Rpim0.0740.0400.384
Total number of observations320116
Number of reflections4788852494960
<I/σ(I)>6.1
Completeness [%]95.398.8100
Redundancy6.75.67.3
CC(1/2)0.9900.738
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP289MES, pH 6.0, PEG3350

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