5Y16
Crystal structure of human DUSP28(Y102H)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2017-07-10 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.987 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 79.341, 79.341, 90.549 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.634 - 2.399 |
R-factor | 0.1923 |
Rwork | 0.187 |
R-free | 0.24000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5y15 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.033 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.063 | 0.309 |
Number of reflections | 12461 | |
<I/σ(I)> | 22.2 | |
Completeness [%] | 93.5 | 89.4 |
Redundancy | 3.9 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 100 mM Tris-HCl pH 8.5, 100 mM NaCl, 28% [w/v] polyethylene glycol 3350 |