5Y0S
Crystal structure of apo Thermotoga maritima TmcAL(Form II)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2014-12-25 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 80.990, 97.954, 144.279 |
Unit cell angles | 90.00, 99.18, 90.00 |
Refinement procedure
Resolution | 49.889 - 2.103 |
R-factor | 0.1707 |
Rwork | 0.169 |
R-free | 0.20740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5y0r |
RMSD bond length | 0.008 |
RMSD bond angle | 1.055 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.160 | |
High resolution limit [Å] | 2.100 | 9.410 | 2.100 |
Rmerge | 0.130 | 0.027 | 1.225 |
Rmeas | 0.141 | 0.030 | 1.328 |
Number of reflections | 128895 | 1517 | 9229 |
<I/σ(I)> | 12.09 | 48.29 | 1.61 |
Completeness [%] | 99.7 | 98.8 | 96.9 |
Redundancy | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Tris, PEG8000, NaCl |