5Y06
Structural characterization of msmeg_4306 from Mycobacterium smegmatis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2016-11-07 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 76.600, 76.600, 84.811 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 66.338 - 2.606 |
R-factor | 0.2419 |
Rwork | 0.240 |
R-free | 0.27130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5y05 |
RMSD bond length | 0.001 |
RMSD bond angle | 0.363 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (dev_2614) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 66.340 | 2.710 |
High resolution limit [Å] | 2.590 | 2.590 |
Rmerge | 0.093 | 0.621 |
Rpim | 0.034 | 0.230 |
Number of reflections | 9152 | 955 |
<I/σ(I)> | 16.4 | |
Completeness [%] | 98.2 | 85.1 |
Redundancy | 8.4 | 7.9 |
CC(1/2) | 0.990 | 0.700 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 20% PEG 8000, 5% PEG 2000 MME, 0.1 M Tris-HCl pH 8.5, 0.1 M magnesium formate |