5XOU
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 7T8 on the guide strand
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2015-05-12 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 112.747, 114.982, 160.441 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.170 - 2.630 |
R-factor | 0.237 |
Rwork | 0.235 |
R-free | 0.27600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kpy |
RMSD bond length | 0.019 |
RMSD bond angle | 2.442 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.720 |
High resolution limit [Å] | 2.600 | 2.630 |
Rmerge | 0.570 | |
Number of reflections | 60975 | |
<I/σ(I)> | 17.7 | 2 |
Completeness [%] | 97.5 | 95.3 |
Redundancy | 4.9 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 308 | 3.0 M NaAc.3H2O, 100 mM Bis-Tris propane, pH 7.0-7.2 |