5XIQ
Crystal Structure of Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in complex with Halofuginone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-09 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.95373 |
Spacegroup name | P 1 |
Unit cell lengths | 76.852, 90.898, 92.869 |
Unit cell angles | 89.86, 80.92, 75.82 |
Refinement procedure
Resolution | 40.320 - 2.190 |
R-factor | 0.1676 |
Rwork | 0.165 |
R-free | 0.20690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4twa |
RMSD bond length | 0.018 |
RMSD bond angle | 1.858 |
Data reduction software | MxCuBE |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.280 | 2.240 |
High resolution limit [Å] | 2.190 | 2.240 | 2.200 |
Rmerge | 0.091 | 0.487 | 0.571 |
Number of reflections | 120215 | 5869 | |
<I/σ(I)> | 7.4 | ||
Completeness [%] | 98.3 | 97.7 | 97.5 |
Redundancy | 4 | 3.8 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 10%(w/v) PEG 4K, 20%(v/v) glycerol, 0.03M of each divalent cation and 0.1M MES/imidazole |